- Delete cookbook/use_cases/healthcare/01_Clinical_Reports_Processing.ipynb - Delete cookbook/use_cases/healthcare/data/clinical_report.txt - Remove references from README.md Healthcare section - Remove Medical Record Analysis card from docs/use-cases.md - Remove Clinical Reports Processing card from docs/cookbook.md - Remove entries from STRATEGIES_SUMMARY.md table and rationale
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🍳 Semantica Cookbook
Welcome to the Semantica Cookbook!
This collection of Jupyter notebooks is designed to take you from a beginner to an expert in building semantic AI applications. Whether you're looking for quick recipes or deep-dive tutorials, you'll find it here.
!!! tip "How to use this Cookbook" - Beginners: Start with the Core Tutorials to learn the basics. - Developers: Check out Advanced Concepts for deep dives into specific features. - Architects: Explore Industry Use Cases for end-to-end solutions.
!!! note "Prerequisites" Before running these notebooks, ensure you have: - Python 3.8+ installed - A basic understanding of Python and Jupyter - An OpenAI API key (for most examples)
!!! success "Installation" Install Semantica from PyPI (recommended):
```bash
pip install semantica
# Or with all optional dependencies:
pip install semantica[all]
```
For more installation options, see the [Installation Guide](installation.md).
� Featured Recipes
Hand-picked tutorials to show you the power of Semantica.
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:material-robot: GraphRAG Complete
Build a production-ready Graph Retrieval Augmented Generation system.
Topics: RAG, LLMs, Vector Search, Graph Traversal
Difficulty: Advanced
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:material-scale-balance: RAG vs. GraphRAG Comparison
Side-by-side comparison of Standard RAG vs. GraphRAG using real-world data.
Topics: RAG, GraphRAG, Benchmarking, Visualization
Difficulty: Intermediate
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:material-robot: GraphRAG Complete
Build a production-ready Graph Retrieval Augmented Generation system.
New Features: Graph Validation, Logical Inference, Hybrid Context.
Topics: RAG, LLMs, Vector Search, Graph Traversal
Difficulty: Advanced
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:material-scale-balance: RAG vs. GraphRAG Comparison
Side-by-side comparison of Standard RAG vs. GraphRAG using real-world data.
New Features: Inference-Enhanced GraphRAG, Reasoning Gap Analysis.
Topics: RAG, GraphRAG, Benchmarking, Visualization
Difficulty: Intermediate
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:material-graph: Your First Knowledge Graph
Go from raw text to a queryable knowledge graph in 20 minutes.
Topics: Extraction, Graph Construction, Visualization
Difficulty: Beginner
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:material-shield-alert: Real-Time Anomaly Detection
Detect anomalies in streaming data using dynamic graphs.
Topics: Streaming, Security, Dynamic Graphs
Difficulty: Advanced
🏁 Core Tutorials
Essential guides to master the Semantica framework.
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:material-hand-wave: Welcome to Semantica
An interactive introduction to the framework's core philosophy and all modules including ingestion, parsing, extraction, knowledge graphs, embeddings, and more.
Topics: Framework Overview, Architecture, All Modules
Difficulty: Beginner
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:material-database-import: Data Ingestion
Techniques for loading data from multiple sources using FileIngestor, WebIngestor, FeedIngestor, StreamIngestor, RepoIngestor, EmailIngestor, DBIngestor, and MCPIngestor.
Topics: File Ingestion, Web Scraping, Database Integration, Streams, Feeds, Repositories, Email, MCP
Difficulty: Beginner
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:material-file-document-outline: Document Parsing
Extracting clean text from complex formats like PDF, DOCX, and HTML.
Topics: OCR, PDF Parsing, Text Extraction
Difficulty: Beginner
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:material-broom: Data Normalization
Pipelines for cleaning, normalizing, and preparing text.
Topics: Text Cleaning, Unicode, Formatting
Difficulty: Beginner
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:material-account-search: Entity Extraction
Using NER to identify people, organizations, and custom entities.
Topics: NER, Spacy, LLM Extraction
Difficulty: Beginner
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:material-relation-many-to-many: Relation Extraction
Discovering and classifying relationships between entities.
Topics: Relation Classification, Dependency Parsing
Difficulty: Beginner
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:material-vector-square: Embedding Generation
Creating and managing vector embeddings for semantic search.
Topics: Embeddings, OpenAI, HuggingFace
Difficulty: Intermediate
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:material-database-search: Vector Store
Setting up vector stores for similarity search and retrieval.
Difficulty: Intermediate
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:material-database-settings: Graph Store
Persisting knowledge graphs in Neo4j or FalkorDB.
Topics: Neo4j, Cypher, Persistence
Difficulty: Intermediate
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:material-sitemap: Ontology
Defining domain schemas and ontologies to structure your data.
Topics: OWL, RDF, Schema Design
Difficulty: Intermediate
🧠 Advanced Concepts
Deep dive into advanced features, customization, and complex workflows.
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:material-flask: Advanced Extraction
Custom extractors, LLM-based extraction, and complex pattern matching.
Topics: Custom Models, Regex, LLMs
Difficulty: Advanced
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:material-chart-network: Advanced Graph Analytics
Centrality, community detection, and pathfinding algorithms.
Topics: PageRank, Louvain, Shortest Path
Difficulty: Advanced
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:material-brain: Advanced Context Engineering
Build a production-grade memory system for AI agents using persistent Vector (FAISS) and Graph (Neo4j) stores.
Topics: Agent Memory, GraphRAG, Entity Injection, Lifecycle Management
Difficulty: Advanced
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:material-monitor-dashboard: Complete Visualization Suite
Creating interactive, publication-ready visualizations of your graphs.
Topics: PyVis, NetworkX, D3.js
Difficulty: Intermediate
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:material-scale-balance: Conflict Resolution
Strategies for handling contradictory information from multiple sources.
Topics: Truth Discovery, Voting, Confidence
Difficulty: Advanced
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:material-export: Multi-Format Export
Exporting to RDF, OWL, JSON-LD, and NetworkX formats.
Topics: Serialization, Interoperability
Difficulty: Intermediate
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:material-source-merge: Multi-Source Integration
Merging data from disparate sources into a unified graph.
Topics: Entity Resolution, Merging, Fusion
Difficulty: Advanced
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:material-pipe: Pipeline Orchestration
Building robust, automated data processing pipelines.
Topics: Workflows, Automation, Error Handling
Difficulty: Advanced
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:material-brain: Reasoning and Inference
Using logical reasoning to infer new knowledge from existing facts.
Topics: Logic Rules, Inference Engines
Difficulty: Advanced
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:material-layers: Semantic Layer Construction
Building a semantic layer over your data warehouse or lake.
Topics: Semantic Layer, Data Warehouse
Difficulty: Advanced
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:material-clock-outline: Temporal Knowledge Graphs
Modeling and querying data that changes over time.
Topics: Time Series, Temporal Logic
Difficulty: Advanced
🏭 Industry Use Cases
Real-world examples and end-to-end applications across various industries.
Biomedical
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:material-pill: Drug Discovery Pipeline
Accelerating drug discovery by connecting genes, proteins, and drugs using PubMed RSS feeds, entity-aware chunking, GraphRAG, and vector similarity search.
Topics: Bioinformatics, KG Construction, GraphRAG, Vector Search
Difficulty: Advanced
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:material-dna: Genomic Variant Analysis
Analyzing genomic variants and their implications for disease using bioRxiv RSS feeds, temporal knowledge graphs, deduplication, and pathway analysis.
Topics: Genomics, Variant Calling, Temporal KGs, Graph Analytics
Difficulty: Advanced
Healthcare
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:material-pill-multiple: Drug Interactions Analysis
Identifying potential drug interactions and contraindications using medical RSS feeds, relation-aware chunking, conflict detection, and safety ontology generation.
Topics: Pharmacology, Drug Safety, Ontology, Conflict Resolution
Difficulty: Advanced
Finance
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:material-finance: Financial Data Integration MCP
Merging financial data from Alpha Vantage API, MCP servers, RSS feeds, and market feeds with seed data integration.
Topics: Finance, Data Fusion, MCP Integration, Real-Time Ingestion
Difficulty: Intermediate
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:material-incognito: Fraud Detection
Identifying fraudulent activities and patterns in transaction networks using temporal knowledge graphs, conflict detection, and pattern recognition.
Topics: Anomaly Detection, Graph Mining, Temporal Analysis, Pattern Detection
Difficulty: Advanced
Blockchain
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:material-bitcoin: DeFi Protocol Intelligence
Analyzing decentralized finance protocols and transaction flows using CoinDesk RSS feeds, ontology-aware chunking, conflict detection, and ontology generation.
Topics: Blockchain, DeFi, Smart Contracts, Ontology, Conflict Resolution
Difficulty: Advanced
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:material-network: Transaction Network Analysis
Mapping and analyzing blockchain transaction networks using blockchain APIs, deduplication, and network pattern detection.
Topics: Blockchain Analytics, Network Analysis, Deduplication, Pattern Detection
Difficulty: Advanced
Cybersecurity
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:material-shield-alert: Real-Time Anomaly Detection
Detecting anomalies in real-time network traffic streams using CVE RSS feeds, Kafka streams, temporal knowledge graphs, and sentence chunking.
Topics: Network Security, Streaming, Temporal KGs, Pattern Detection
Difficulty: Advanced
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:material-robot-angry: Threat Intelligence Hybrid RAG
Combining enhanced GraphRAG with threat intelligence for security insights using security RSS feeds, entity-aware chunking, deduplication, and temporal knowledge graphs.
Topics: Threat Intelligence, GraphRAG, Security, Hybrid Retrieval
Difficulty: Advanced
Intelligence
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:material-account-network: Criminal Network Analysis
Analyze criminal networks with graph analytics and key player detection using OSINT RSS feeds, deduplication, and network centrality analysis.
Topics: Forensics, Social Network Analysis, Deduplication, Graph Analytics
Difficulty: Advanced
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:material-file-search: Intelligence Analysis Orchestrator Worker
Comprehensive intelligence analysis using pipeline orchestrator with multiple RSS feeds, conflict detection, and multi-source integration.
Topics: Intelligence Analysis, Pipeline Orchestration, Multi-Source Integration, Conflict Resolution
Difficulty: Advanced
Trading
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:material-shield-check: Risk Assessment
Assessing trading risks using knowledge graphs, GraphRAG, entity-aware chunking, and portfolio risk modeling with Yahoo Finance API and RSS feeds.
Topics: Risk Management, Portfolio Analysis, GraphRAG, Dependency Analysis
Difficulty: Advanced
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:material-newspaper-variant: News Sentiment Analysis
Analyzing news sentiment for trading signals and market predictions using financial RSS feeds, semantic transformer chunking, enhanced GraphRAG, and sentiment extraction.
Topics: Sentiment Analysis, Trading Signals, GraphRAG, Correlation Analysis
Difficulty: Intermediate
Renewable Energy
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:material-wind-turbine: Energy Market Analysis
Analyzing trends and pricing in the renewable energy market using energy RSS feeds, EIA API, temporal knowledge graphs, TemporalPatternDetector, and seed data integration.
Topics: Energy, Time Series, Temporal Analysis, Trend Prediction
Difficulty: Intermediate
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:material-transmission-tower: Smart Grid Management
Optimizing power grid management and distribution using sensor streams, temporal knowledge graphs, token chunking, and real-time monitoring with failure prediction.
Topics: Grid Optimization, Energy Distribution, Stream Processing, Real-Time Monitoring
Difficulty: Advanced
Supply Chain
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:material-truck-delivery: Supply Chain Data Integration
Integrating supply chain data to optimize logistics and reduce risk using logistics RSS feeds, deduplication, and multi-source relationship mapping.
Topics: Logistics, Risk Management, Data Integration, Deduplication
Difficulty: Advanced
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:material-alert-octagon: Supply Chain Risk Management
Managing and mitigating supply chain risks using knowledge graphs with supply chain RSS feeds, conflict detection, and dependency analysis.
Topics: Risk Management, Supply Chain Resilience, Conflict Resolution, Dependency Analysis
Difficulty: Advanced
🛠️ How to Run
To run these notebooks locally:
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Install Semantica from PyPI (recommended):
pip install semantica[all] pip install jupyter -
Or install from source (for development):
git clone https://github.com/Hawksight-AI/semantica.git cd semantica pip install -e .[all] pip install jupyter -
Launch Jupyter:
jupyter notebook
!!! tip "Using Docker"
You can also run the cookbook using Docker:
bash docker run -p 8888:8888 hawksight/semantica-cookbook