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semantica/docs/integrations
Shinde vinayak rao patil d94d8f6ab8 Feat/crewai integration (#988)
* feat(crewai): add first-class CrewAI integration (#962)

Add native CrewAI support so Crew agents can share a ContextGraph and
AgentContext via BaseTool subclasses and a BaseKnowledgeSource, matching
the existing agno integration pattern.

- SemanticaKGTool: 5 KG actions (extract_entities, extract_relations,
  add_to_graph, query_graph, find_related) with sync run()/async arun()
- SemanticaDecisionTool: 5 decision-intelligence actions
  (record_decision, find_precedents, trace_causal_chain,
  analyze_impact, check_policy) over AgentContext
- SemanticaKnowledgeSource: serializes a ContextGraph into crew
  knowledge storage; bridges legacy load_content() and current
  validate_content()/aadd() contracts for crewai>=0.80.0
- All classes degrade gracefully when crewai is absent
- New pip extra crewai=... included in the all bundle
- 70 new tests (stub-based present-case + subprocess degradation path)
- Docs: integrations/crewai.md, docs.json nav, README matrix updates

* fix(crewai): harden tools against real Semantica dataclass shapes (#962)

Bugs found during live testing with crewai 1.15.16:

- SemanticaKGTool.add_to_graph crashed on real Entity/Relation dataclasses
  ('str' object has no attribute 'end_char'): string names were passed to
  extract_relations(entities=...), which requires Entity objects, and the
  tool read .name/.source/.target instead of Entity's .text/.label and
  Relation's .subject/.object. Add shape-agnostic field helpers.
- SemanticaDecisionTool() created an AgentContext without a knowledge_graph,
  so _decision_backend was never set and record_decision raised 'Decision
  tracking is not enabled'. Wire in a ContextGraph.
- record_decision hard-failed when the agent omitted optional fields; fall
  back to category='general', reasoning='agent decision',
  outcome='recorded'.

Add tests covering real Entity/Relation dataclass shapes and the live
auto-created AgentContext path (now 77 crewai tests, 212 total).

* fix(crewai): make find_related traverse edges undirected (#962)

ContextGraph.get_neighbors only follows outgoing edges, so a node whose
only edge is incoming (A -> B) reported no related concepts. Rebuild a
bidirectional adjacency from find_edges() in SemanticaKGTool._find_related
so 'related' honors both directions.

* fix(crewai): harden tools for checkpoint serialization and correct action semantics (#962)

- Exclude live graph/context/extractor state from JSON serialization
  (model_dump(mode="json")) so CrewAI checkpointing no longer raises
  PydanticSerializationError; model_post_init self-heals defaults on restore
- query_graph now searches node content via graph.query() plus id/type
- trace_causal_chain returns an explicit error when causal tracing is
  unavailable instead of substituting similarity precedents; call
  trace_decision_causality(..., max_depth=...) with the correct kwarg name
- find_precedents propagates max_precedents/limit to the backend instead of
  being silently capped at 10
- Serialize add_to_graph batches under a module lock to prevent concurrent
  double-counting; skip nameless entities instead of creating repr()-junk nodes
- aadd() runs CPU-bound serialization in a thread executor
- Mirror crewai args_schema serialize/restore in the conftest stub and add
  serialization regression tests (crewai: 92 tests)

* fix(crewai): correct check_policy coercion, guard causal tracing, and harden concurrency (#962)

- _eval_rule now coerces rule values type-aware: bool("false") was truthy, so
  'enabled == false' reported a violation for enabled=false, and string datums
  like "0.90" were compared lexicographically instead of numerically
- _trace_causal_chain no longer raises AttributeError (which escaped _run) when
  the decision context lacks knowledge_graph; returns honest error JSON
- SemanticaKnowledgeSource storage failures log an actionable ERROR; without a
  configured crew embedder agents previously retrieved nothing silently
- add_to_graph uses a per-graph re-entrant lock (WeakKeyDictionary) instead of a
  process-global one: independent graphs no longer serialize each other and
  re-entrant extractor callbacks cannot deadlock
- entity/relation confidence=None normalizes to 1.0 instead of failing the
  whole extraction with float(None)
- add subprocess integration test against real crewai covering Crew-level
  serialization round-trip and checkpoint restore (stub tests cannot see it)
- docs: embedder requirement for SemanticaKnowledgeSource; resume contract note

* fix(crewai): surface knowledge-source save failures at ERROR when storage is wired (#962)

Re-verification against real crewai showed the embedder-missing failure raises
ValueError even though storage IS wired, so the old except-ValueError branch
mislabeled it as 'storage not wired' and logged DEBUG — hiding the failure.
Distinguish by storage presence instead of exception type: storage is None ->
DEBUG keep-in-memory (legitimate standalone use); storage wired but save()
raises -> actionable ERROR. Add regression test mirroring real crewai's
ValueError-on-missing-embedder behavior.

* fix(crewai): expose run()/arun() entry points in degraded mode (#962)

The public crewai contract is run()/arun(); without crewai installed they were
missing (only the private _run existed), so the documented 'usable without
crewai' path raised AttributeError at the entry point. Define them in degraded
mode only, leaving crewai's BaseTool implementations untouched when present.
Extend the degradation subprocess test to exercise run() and arun().

* fix(crewai): standardize query shape, field-name rules, and restore-state flag

- _query_graph: id/type matches now return the same schema as content
  matches (id/type/label/content/score) instead of a bare list
- _eval_rule: non-greedy field capture so hyphen/dot/space JSON keys
  (e.g. "risk-score >= 0.9") are addressable in policy rules
- add had_live_state/reconstructed_state so checkpoint-restored tools
  and knowledge sources signal that their live graph/context was lost
  and an empty one reconstructed; knowledge source no longer hides the
  loss by eagerly rebuilding its graph inside __init__ (pydantic calls
  __init__ during model_validate)

* fix(crewai): address Qodo review — confidence errors, string trim, holistic availability

- record_decision: stop calling float() in _run, so malformed confidence
  values surface as JSON errors (via _record_decision's handling) instead
  of crashing the tool
- _coerce_value: return the stripped string for non-numeric literals so
  whitespace-padded decision_data fields match policy rules
- centralize crewai availability in _availability.py so the exported
  CREWAI_AVAILABLE flag is holistic across tools and knowledge source
  (previously each module probed crewai independently and the package
  flag came from decision_tool only)

* ci: regenerate requirements-ci.txt for the crewai extra

The crewai extra in pyproject.toml brings in crewai, crewai-tools and
transitive deps (chromadb, lancedb, ...). Recompile with
uv==0.12.1 per CONTRIBUTING.md so the CI staleness check passes.

* ci: keep crewai out of the locked CI dependency set

crewai (all versions) hard-requires chromadb~=1.1.0, which carries a
pre-authentication code-injection advisory (CVE-2026-45829 / GHSA-f4j7-r4q5-qw2c)
with NO fixed release — even the latest 1.5.9 is affected. Keeping crewai in
the 'all' extra failed pip-audit and the safety check on requirements-ci.txt.

- drop crewai from the 'all' aggregate (standalone semantica[crewai] extra is
  unchanged and still installs crewai)
- stop listing crewai-tools in the extra: the integration only uses crewai core
  (BaseTool, BaseKnowledgeSource) and crewai-tools pulled extra transitive deps
- regenerate requirements-ci.txt: OSV/pip-audit 0 vulnerabilities, safety 0
  vulnerabilities, staleness check matches

* docs(crewai): document crewai extra scope and chromadb CVE-2026-45829

- CHANGELOG: extra is crewai>=0.80.0 only (no crewai-tools) and is not
  part of the 'all' bundle, with the chromadb CVE-2026-45829 reason
- integrations/crewai/README.md: add a security warning that installing
  the extra pulls chromadb~=1.1.0, which is affected by the unpatched
  pre-auth code-injection CVE-2026-45829

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