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feat(vector_store): add weaviate iter_all
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@@ -611,6 +611,100 @@ class WeaviateStore:
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self.logger.warning(f"Failed to fetch Weaviate objects by metadata filter: {e}")
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return results if results else []
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def iter_all(self, batch_size: int = 500):
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"""
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Iterate over every stored object using Weaviate's native cursor.
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Weaviate paginates by the UUID of the last object seen (``after``),
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not by row offset, so this is exposed instead of
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scan_vectors(offset, limit): a row number such as 100000 cannot be
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translated into the correct UUID without walking there.
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VectorStore.iter_vectors() prefers this method when it is present.
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Assumes a single unnamed vector per object, matching how get_vector()
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and filter_by_metadata() already read them back. Collections
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configured with named vectors return a mapping here and are not
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handled.
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Args:
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batch_size: Objects to request per fetch_objects() call
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Yields:
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Result dicts with 'id', 'metadata', and 'vector', in cursor order
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Raises:
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ProcessingError: If the collection is not initialized. Errors are
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raised rather than swallowed because a scan that silently
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yields nothing is indistinguishable from an empty source,
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which would let a caller such as `store migrate` report
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success having copied nothing (issue #1083).
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"""
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if self.collection is None or not WEAVIATE_AVAILABLE:
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raise ProcessingError(
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"Collection not initialized. Call get_collection() first."
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)
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after_cursor = None
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scanned_count = 0
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use_after_cursor = True
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while True:
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kwargs = {"limit": batch_size, "include_vector": True}
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if use_after_cursor and after_cursor is not None:
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kwargs["after"] = after_cursor
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try:
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objs = self.collection.query.fetch_objects(**kwargs)
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except TypeError:
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# Client versions without `after` fall back to numeric offset,
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# then to no pagination argument at all. Mirrors the
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# degradation chain in filter_by_metadata().
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if "after" not in kwargs:
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raise
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use_after_cursor = False
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kwargs.pop("after", None)
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try:
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objs = self.collection.query.fetch_objects(
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offset=scanned_count, **kwargs
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)
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except TypeError:
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objs = self.collection.query.fetch_objects(**kwargs)
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batch_objects = getattr(objs, "objects", None) if objs else None
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if not batch_objects:
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return
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for obj in batch_objects:
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obj_uuid = getattr(obj, "uuid", None)
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raw_vector = getattr(obj, "vector", None)
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yield {
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"id": str(obj_uuid) if obj_uuid is not None else None,
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"metadata": getattr(obj, "properties", None) or {},
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"vector": (
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np.array(raw_vector)
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if raw_vector is not None and len(raw_vector) > 0
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else None
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),
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}
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scanned_count += len(batch_objects)
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# A short page means the collection is exhausted.
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if len(batch_objects) < batch_size:
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return
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last_uuid = getattr(batch_objects[-1], "uuid", None)
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if last_uuid is None:
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return
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next_cursor = str(last_uuid)
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# There is no result cap on a full scan, so a cursor that stops
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# advancing would loop forever. Stop instead of re-reading the
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# same page.
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if use_after_cursor and next_cursor == after_cursor:
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return
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after_cursor = next_cursor
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def query_vectors(
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self,
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@@ -0,0 +1,192 @@
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"""Tests for WeaviateStore.iter_all() cursor enumeration.
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weaviate-client is not installed in this environment, so these drive the real
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WeaviateStore against MagicMocks, following the pattern already used for
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weaviate in test_backend_metadata_filtering.py.
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"""
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from unittest.mock import MagicMock, patch
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import numpy as np
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import pytest
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from semantica.utils.exceptions import ProcessingError
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from semantica.vector_store.weaviate_store import WeaviateStore
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def _obj(uuid, properties=None, vector=None):
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"""Stand-in for a weaviate v4 returned object."""
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obj = MagicMock()
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obj.uuid = uuid
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obj.properties = properties
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obj.vector = vector
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return obj
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def _page(objects):
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"""Stand-in for a fetch_objects() response."""
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response = MagicMock()
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response.objects = objects
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return response
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def _store_with_pages(*pages):
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store = WeaviateStore()
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store.collection = MagicMock()
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store.collection.query.fetch_objects.side_effect = list(pages)
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return store
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@patch("semantica.vector_store.weaviate_store.WEAVIATE_AVAILABLE", True)
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def test_iter_all_threads_uuid_cursor_across_pages():
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"""The next page must continue after the last object's UUID."""
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store = _store_with_pages(
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_page([_obj("uuid-1"), _obj("uuid-2")]),
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_page([_obj("uuid-3")]),
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)
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result = list(store.iter_all(batch_size=2))
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assert [item["id"] for item in result] == ["uuid-1", "uuid-2", "uuid-3"]
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calls = store.collection.query.fetch_objects.call_args_list
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assert "after" not in calls[0][1]
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assert calls[1][1]["after"] == "uuid-2"
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@patch("semantica.vector_store.weaviate_store.WEAVIATE_AVAILABLE", True)
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def test_iter_all_stops_on_short_page():
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"""A page smaller than batch_size means the collection is exhausted."""
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store = _store_with_pages(_page([_obj("uuid-1")]))
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result = list(store.iter_all(batch_size=5))
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assert [item["id"] for item in result] == ["uuid-1"]
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assert store.collection.query.fetch_objects.call_count == 1
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@patch("semantica.vector_store.weaviate_store.WEAVIATE_AVAILABLE", True)
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def test_iter_all_stops_when_cursor_stops_advancing():
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"""A full scan has no result cap, so a stalled cursor would loop forever.
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Pathological rather than expected from a real server, but termination is
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the property that matters: this must not hang.
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"""
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store = WeaviateStore()
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store.collection = MagicMock()
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store.collection.query.fetch_objects.return_value = _page(
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[_obj("same-uuid"), _obj("same-uuid")]
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)
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result = list(store.iter_all(batch_size=2))
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assert store.collection.query.fetch_objects.call_count == 2
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assert len(result) == 4
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@patch("semantica.vector_store.weaviate_store.WEAVIATE_AVAILABLE", True)
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def test_iter_all_empty_collection_yields_nothing():
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store = _store_with_pages(_page([]))
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assert list(store.iter_all()) == []
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@patch("semantica.vector_store.weaviate_store.WEAVIATE_AVAILABLE", True)
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def test_iter_all_converts_objects_to_the_shared_result_shape():
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store = _store_with_pages(
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_page([_obj("uuid-7", properties={"tag": "x"}, vector=[0.1, 0.2, 0.3])]),
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)
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item = list(store.iter_all())[0]
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assert item["id"] == "uuid-7"
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assert item["metadata"] == {"tag": "x"}
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np.testing.assert_allclose(item["vector"], np.array([0.1, 0.2, 0.3]))
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@patch("semantica.vector_store.weaviate_store.WEAVIATE_AVAILABLE", True)
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def test_iter_all_handles_missing_properties_and_vector():
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store = _store_with_pages(_page([_obj("uuid-1", properties=None, vector=None)]))
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item = list(store.iter_all())[0]
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assert item["metadata"] == {}
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assert item["vector"] is None
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@patch("semantica.vector_store.weaviate_store.WEAVIATE_AVAILABLE", True)
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def test_iter_all_treats_empty_vector_as_none():
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store = _store_with_pages(_page([_obj("uuid-1", vector=[])]))
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assert list(store.iter_all())[0]["vector"] is None
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@patch("semantica.vector_store.weaviate_store.WEAVIATE_AVAILABLE", True)
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def test_iter_all_requests_vectors():
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"""Weaviate omits vectors unless include_vector is set."""
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store = _store_with_pages(_page([]))
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list(store.iter_all(batch_size=64))
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kwargs = store.collection.query.fetch_objects.call_args[1]
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assert kwargs["include_vector"] is True
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assert kwargs["limit"] == 64
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@patch("semantica.vector_store.weaviate_store.WEAVIATE_AVAILABLE", True)
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def test_iter_all_falls_back_to_offset_when_after_unsupported():
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"""Older clients reject `after`; the scan degrades to numeric offset."""
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store = WeaviateStore()
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store.collection = MagicMock()
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seen = {"calls": 0}
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def _fetch(**kwargs):
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if "after" in kwargs:
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raise TypeError("unexpected keyword argument 'after'")
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seen["calls"] += 1
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if seen["calls"] == 1:
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return _page([_obj("uuid-1"), _obj("uuid-2")])
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return _page([_obj("uuid-3")])
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store.collection.query.fetch_objects.side_effect = _fetch
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result = list(store.iter_all(batch_size=2))
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assert [item["id"] for item in result] == ["uuid-1", "uuid-2", "uuid-3"]
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offsets = [
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c[1]["offset"]
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for c in store.collection.query.fetch_objects.call_args_list
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if "offset" in c[1]
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]
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assert offsets == [2]
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@patch("semantica.vector_store.weaviate_store.WEAVIATE_AVAILABLE", True)
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def test_iter_all_raises_when_collection_not_initialized():
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"""Must fail loudly, not yield nothing.
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An empty scan is indistinguishable from an empty source, which would let
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`store migrate` report success having copied nothing (issue #1083).
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"""
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store = WeaviateStore()
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with pytest.raises(ProcessingError, match="Collection not initialized"):
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list(store.iter_all())
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@patch("semantica.vector_store.weaviate_store.WEAVIATE_AVAILABLE", False)
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def test_iter_all_raises_when_weaviate_unavailable():
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store = WeaviateStore()
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store.collection = MagicMock()
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with pytest.raises(ProcessingError):
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list(store.iter_all())
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@patch("semantica.vector_store.weaviate_store.WEAVIATE_AVAILABLE", True)
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def test_iter_all_propagates_fetch_errors():
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store = WeaviateStore()
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store.collection = MagicMock()
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store.collection.query.fetch_objects.side_effect = RuntimeError("connection reset")
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with pytest.raises(RuntimeError, match="connection reset"):
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list(store.iter_all())
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