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* docs: replace Exported Classes import blocks with summary tables across all 25 modules * docs: add method/parameter tables to parse, ingest, ontology, normalize, triplet_store, change_management, conflicts, export, graph_store, provenance, and semantic_extract modules
379 lines
14 KiB
Markdown
379 lines
14 KiB
Markdown
---
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title: "Export Module"
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description: "Export knowledge graphs to RDF, Parquet, LPG, ArangoDB AQL, CSV, GraphML, OWL, JSON-LD, and vector formats."
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icon: "file-export"
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---
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`semantica.export` serializes knowledge graphs to every downstream format — semantic web standards, analytics pipelines, graph databases, and vector stores. All exporters share a consistent `export(graph, path, format)` interface.
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## Exported Classes
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| Class | Output formats | Notes |
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| --- | --- | --- |
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| `RDFExporter` | Turtle, JSON-LD, N-Triples, RDF/XML | Optional PROV-O provenance embedding |
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| `ParquetExporter` | `.parquet` | PyArrow-typed, Hive-partition support |
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| `LPGExporter` | Cypher `CREATE`/`MERGE` | Neo4j and Memgraph compatible |
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| `ArangoAQLExporter` | AQL `INSERT` | Vertex and edge collections |
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| `GraphExporter` | GraphML, GEXF, Graphviz DOT | Standard graph interchange formats |
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| `OWLExporter` | OWL 2.0 in Turtle/XML/JSON-LD | Full ontology serialization |
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| `CSVExporter` | `.csv` | Flat nodes + edges tables |
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| `VectorExporter` | JSON, NumPy `.npy`, FAISS index | Embedding vector export |
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| `ArrowExporter` | Apache Arrow IPC | Zero-copy transfer to Pandas/Polars/Spark |
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| `DistanceExporter` | JSON/CSV matrix | Semantic distance matrices and ego-graphs |
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| `ReportGenerator` | HTML, Markdown, JSON | Human-readable analytics reports |
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| `NamespaceManager` | — | Register and resolve RDF namespace prefixes |
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## What You Get
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<CardGroup cols={2}>
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<Card title="RDFExporter" icon="diagram-project">
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Turtle, JSON-LD, N-Triples, RDF/XML with namespace management and optional PROV-O provenance embedding.
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</Card>
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<Card title="ParquetExporter" icon="layer-group">
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Columnar storage for Spark, BigQuery, Databricks, and Snowflake with explicit PyArrow typing.
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</Card>
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<Card title="LPG & ArangoDB" icon="server">
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Cypher CREATE/MERGE for Neo4j and Memgraph; AQL INSERT for ArangoDB vertex and edge collections.
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</Card>
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<Card title="Graph Formats" icon="chart-bar">
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GraphML, GEXF, DOT for Gephi and Graphviz. OWL 2.0 ontology export in Turtle, XML, and JSON-LD.
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</Card>
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<Card title="Vector & Arrow" icon="vector-square">
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JSON, NumPy `.npy`, and FAISS index export for embedding vectors. Apache Arrow IPC for zero-copy transfer.
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</Card>
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<Card title="Distance & Reports" icon="chart-line">
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Distance matrix CSV/JSON from Distance Intelligence (v0.5.0). HTML, Markdown, and JSON analytics reports.
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</Card>
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</CardGroup>
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## Quick Start
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<Steps>
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<Step title="Choose your format and instantiate an exporter">
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```python
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from semantica.export import RDFExporter
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exporter = RDFExporter()
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```
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</Step>
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<Step title="Export the graph">
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```python
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# Export to RDF string, then write to file
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rdf_str = exporter.export_to_rdf(graph, format="turtle")
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with open("output.ttl", "w") as f:
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f.write(rdf_str)
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```
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</Step>
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<Step title="Use convenience functions for one-liners">
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```python
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from semantica.export import export_rdf, export_parquet, export_csv
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export_rdf(graph, "output.ttl", format="turtle")
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export_parquet(graph, "output/", compression="snappy")
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export_csv(graph, "nodes.csv", target="nodes")
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```
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</Step>
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<Step title="Stream large graphs to avoid OOM">
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```python
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from semantica.export import ParquetExporter
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exporter = ParquetExporter(compression="snappy")
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exporter.export_stream(graph, output_dir="output/", batch_size=10_000)
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```
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</Step>
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</Steps>
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## RDFExporter Constructor Parameters
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| Parameter | Type | Default | Description |
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| --------- | ---- | ------- | ----------- |
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| `namespace_manager` | `NamespaceManager` | `None` | Custom namespace prefix manager |
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| `include_provenance` | `bool` | `False` | Embed W3C PROV-O lineage triples |
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| `provenance_manager` | `ProvenanceManager` | `None` | Provenance source when `include_provenance=True` |
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## Exporters
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<Tabs>
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<Tab title="RDF">
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Export to W3C RDF formats — Turtle, JSON-LD, N-Triples, and RDF/XML:
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```python
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from semantica.export import RDFExporter
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exporter = RDFExporter()
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# Export to RDF string — write to file manually
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rdf_str = exporter.export_to_rdf(graph, format="turtle") # Turtle (most readable)
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rdf_str = exporter.export_to_rdf(graph, format="json-ld") # JSON-LD (APIs, Linked Data)
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rdf_str = exporter.export_to_rdf(graph, format="nt") # N-Triples (streaming-friendly)
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rdf_str = exporter.export_to_rdf(graph, format="xml") # RDF/XML (W3C standard)
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with open("output.ttl", "w") as f:
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f.write(exporter.export_to_rdf(graph, format="turtle"))
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```
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**Custom namespace management:**
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```python
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from semantica.export import NamespaceManager, RDFExporter
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ns_manager = NamespaceManager()
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ns_manager.register("ex", "http://example.org/")
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ns_manager.register("schema", "https://schema.org/")
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exporter = RDFExporter(namespace_manager=ns_manager)
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```
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**Export with PROV-O provenance:**
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```python
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from semantica.export import RDFExporter
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from semantica.provenance import ProvenanceManager
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provenance = ProvenanceManager()
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# ... track entities during extraction ...
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exporter = RDFExporter(include_provenance=True, provenance_manager=provenance)
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exporter.export_to_file(graph, "output_with_prov.ttl", format="turtle")
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# → Each entity's prov:wasGeneratedBy, prov:wasDerivedFrom, prov:hadPrimarySource
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# triples are included alongside the entity data triples
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```
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</Tab>
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<Tab title="Columnar & Analytics">
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Columnar formats for analytics pipelines and human-readable export:
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```python
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from semantica.export import ParquetExporter
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exporter = ParquetExporter(compression="snappy")
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# compression options: snappy | gzip | brotli | zstd | lz4
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# Export nodes and edges as separate Parquet files
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exporter.export_nodes(graph, "nodes.parquet")
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exporter.export_edges(graph, "edges.parquet")
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# Export full graph partitioned by node type
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exporter.export(graph, output_dir="graph_parquet/", partition_by="node_type")
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```
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Schema is explicitly typed with PyArrow for clean Spark/BigQuery ingestion.
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```python
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from semantica.export import CSVExporter
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exporter = CSVExporter(delimiter=",")
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exporter.export_nodes(graph, "nodes.csv")
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exporter.export_edges(graph, "edges.csv")
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```
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```python
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from semantica.export import SemanticNetworkYAMLExporter
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exporter = SemanticNetworkYAMLExporter()
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exporter.export(graph, "graph.yaml")
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yaml_str = exporter.to_string(graph)
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```
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</Tab>
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<Tab title="Graph DB Import">
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Export Cypher or AQL statements for direct graph database import:
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```python
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from semantica.export import LPGExporter
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exporter = LPGExporter()
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# CREATE statements
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cypher = exporter.to_cypher(graph)
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exporter.export(graph, "import.cypher", format="cypher")
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# MERGE statements (idempotent — safe to re-run)
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cypher_merge = exporter.to_cypher(graph, use_merge=True)
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```
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```python
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from semantica.export import ArangoAQLExporter
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exporter = ArangoAQLExporter(
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vertex_collection="entities",
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edge_collection="relationships"
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)
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aql = exporter.export(graph) # returns AQL string
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exporter.export_to_file(graph, "import.aql")
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```
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</Tab>
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<Tab title="Visualization">
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Export for graph visualization tools and OWL ontology distribution:
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```python
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from semantica.export import GraphExporter
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exporter = GraphExporter()
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exporter.export(graph, "graph.graphml", format="graphml") # Gephi, yEd
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exporter.export(graph, "graph.gexf", format="gexf") # Gephi streaming
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exporter.export(graph, "graph.dot", format="dot") # Graphviz
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```
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```python
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from semantica.export import OWLExporter
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exporter = OWLExporter()
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exporter.export(ontology, path="ontology.ttl", format="turtle")
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exporter.export(ontology, path="ontology.owl", format="xml")
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exporter.export(ontology, path="ontology.json", format="json-ld")
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```
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</Tab>
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<Tab title="Specialized">
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Vector embeddings, Arrow IPC, distance matrices, and analytics reports:
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```python
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from semantica.export import VectorExporter
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exporter = VectorExporter()
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exporter.export(embeddings, metadata, "vectors.json", format="json")
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exporter.export(embeddings, metadata, "vectors.npy", format="numpy")
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exporter.export(embeddings, metadata, "vectors.faiss", format="faiss")
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```
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```python
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from semantica.export import ArrowExporter
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exporter = ArrowExporter()
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exporter.export(graph, "graph.arrow") # requires pyarrow
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```
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```python
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from semantica.export import DistanceExporter
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exporter = DistanceExporter()
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exporter.export_matrix(distance_matrix, node_labels, "distances.csv")
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exporter.export_ego(ego_neighborhood, center_node="Apple Inc.", path="ego.json")
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```
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```python
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from semantica.export import ReportGenerator
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generator = ReportGenerator()
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generator.generate(graph, analytics_result, "report.html", format="html")
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generator.generate(graph, analytics_result, "report.md", format="markdown")
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generator.generate(graph, analytics_result, "report.json", format="json")
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```
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</Tab>
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</Tabs>
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## Streaming Export
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For graphs too large to hold in memory, use streaming export — writes incrementally without buffering the full graph:
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```python
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from semantica.export import RDFExporter, ParquetExporter
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# Stream RDF — yields triples one at a time, no full-graph buffer
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exporter = RDFExporter()
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with exporter.stream(graph, format="turtle") as stream:
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for triple_line in stream:
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output_file.write(triple_line)
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# Stream Parquet — writes row groups incrementally
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exporter = ParquetExporter(compression="snappy")
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exporter.export_stream(graph, output_dir="output/", batch_size=10_000)
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```
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Streaming is recommended for graphs with > 500k nodes.
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## Selective Export
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```python
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# Export a subgraph
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subgraph = graph.subgraph(node_ids=["apple_inc", "steve_jobs"])
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export_rdf(subgraph, "subgraph.ttl", format="turtle")
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# Export nodes by type
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org_nodes = graph.filter(node_type="Organization")
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export_parquet(org_nodes, "organizations.parquet")
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```
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## Convenience Functions
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```python
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from semantica.export import (
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export_rdf, export_parquet, export_csv, export_lpg,
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export_arango, export_graph, export_owl, export_vector,
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export_arrow, generate_report
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)
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export_rdf(graph, "output.ttl", format="turtle")
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export_parquet(graph, "output/", compression="snappy")
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export_csv(graph, "nodes.csv", target="nodes")
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export_lpg(graph, "import.cypher", method="cypher")
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export_arango(graph, "import.aql")
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export_graph(graph, "graph.graphml", format="graphml")
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```
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## Format Reference
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| Format | Exporter | Output | Best For |
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| ------ | -------- | ------ | -------- |
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| `turtle` | `RDFExporter` | `.ttl` | Readable RDF, ontology sharing |
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| `json-ld` | `RDFExporter` | `.jsonld` | APIs, Linked Data, JSON pipelines |
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| `nt` | `RDFExporter` | `.nt` | Streaming RDF, line-by-line processing |
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| `xml` | `RDFExporter` | `.xml` | W3C RDF/XML, broadest compatibility |
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| `parquet` | `ParquetExporter` | `.parquet` | Spark, BigQuery, Databricks, Snowflake |
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| `cypher` | `LPGExporter` | `.cypher` | Neo4j, Memgraph import |
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| `aql` | `ArangoAQLExporter` | `.aql` | ArangoDB vertex + edge collections |
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| `graphml` | `GraphExporter` | `.graphml` | Gephi, yEd visualization |
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| `gexf` | `GraphExporter` | `.gexf` | Gephi streaming format |
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| `dot` | `GraphExporter` | `.dot` | Graphviz rendering |
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| `owl` | `OWLExporter` | `.owl` / `.ttl` | OWL 2.0 ontology distribution |
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| `csv` | `CSVExporter` | `.csv` | Spreadsheets, simple pipelines |
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| `yaml` | `SemanticNetworkYAMLExporter` | `.yaml` | Human-readable, config-driven use |
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| `arrow` | `ArrowExporter` | `.arrow` | Zero-copy inter-process transfer |
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| `numpy` | `VectorExporter` | `.npy` | NumPy arrays from embeddings |
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| `faiss` | `VectorExporter` | `.faiss` | Direct FAISS index files |
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| `distance-matrix` | `DistanceExporter` | `.csv` / `.json` | Distance Intelligence matrices |
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| `html` | `ReportGenerator` | `.html` | Human-readable analytics reports |
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| `markdown` | `ReportGenerator` | `.md` | Documentation, GitHub |
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## Tips and Common Pitfalls
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<Tip>
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**Use `turtle` for human readability, `nt` for streaming.** Turtle is compact and readable for debugging and sharing ontologies. N-Triples (`.nt`) is line-oriented — one triple per line — making it safe to stream, concatenate, and process with standard Unix tools without loading the full file.
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</Tip>
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<Tip>
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**Use `ParquetExporter` for downstream analytics.** Parquet preserves column types (int, float, datetime) that CSV loses and is natively supported by Spark, BigQuery, Databricks, and Snowflake. Use `compression="snappy"` for a good balance of speed and compression ratio.
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</Tip>
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<Warning>
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**Stream large graphs with `export_stream()`.** For graphs with more than 500k nodes, use `exporter.export_stream(graph, ...)` instead of building the full RDF string in memory. Streaming writes incrementally — without it, a million-node export will likely OOM.
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</Warning>
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<Tip>
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**Include provenance for compliance exports.** For HIPAA, SOX, or FDA 21 CFR Part 11 exports, pass `include_provenance=True` to `RDFExporter`. This embeds W3C PROV-O lineage triples inline — auditors can verify every fact's source from a single file rather than cross-referencing separate systems.
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</Tip>
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<Tip>
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**Use selective export to reduce file size.** `graph.subgraph(node_ids=[...])` and `graph.filter(node_type="Organization")` let you export only the relevant subset. Full graph exports for compliance reports include noise; scoped exports are faster to produce, review, and transfer.
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</Tip>
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<Warning>
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**Match your export format to your consumer.** Neo4j → `cypher`; ArangoDB → `aql`; Gephi/yEd → `graphml` or `gexf`; semantic web tools → `turtle` or `json-ld`; analytics pipelines → `parquet`; zero-copy IPC → `arrow`. Using the wrong format forces the consumer to convert it, adding latency and potential data loss.
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</Warning>
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<CardGroup cols={2}>
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<Card title="Triplet Store" icon="table" href="triplet_store">
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Store RDF exports in a SPARQL-queryable backend.
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</Card>
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<Card title="Ontology" icon="sitemap" href="ontology">
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Export OWL ontologies.
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</Card>
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<Card title="Provenance" icon="link" href="provenance">
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Include provenance metadata in RDF exports.
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</Card>
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<Card title="Pipeline" icon="gear" href="pipeline">
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Add export as a final pipeline step.
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</Card>
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</CardGroup>
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