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semantica/docs/cookbook.md
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KaifAhmad1 7050f58d47 docs: update all repo links to github.com/semantica-agi/semantica
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---
title: "Cookbook"
description: "Interactive Jupyter notebooks covering everything from your first knowledge graph to production GraphRAG systems."
icon: "flask"
---
<Tip>
**Where to start:**
- **New to Semantica** — begin with [Core Tutorials](#core-tutorials)
- **Building an application** — see [Advanced Concepts](#advanced-concepts) or [Industry Use Cases](#industry-use-cases)
- **Need installation help** — see the [Installation Guide](installation)
</Tip>
<Note>
Prerequisites: Python 3.8+, Jupyter, and an API key for your preferred LLM provider.
</Note>
---
## Featured Recipes
<CardGroup cols={2}>
<Card title="Your First Knowledge Graph" icon="diagram-project" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/introduction/08_Your_First_Knowledge_Graph.ipynb">
Go from raw text to a queryable knowledge graph in 20 minutes.
**Topics:** Extraction, Graph Construction, Visualization · **Difficulty:** Beginner
</Card>
<Card title="GraphRAG Complete" icon="robot" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/use_cases/advanced_rag/01_GraphRAG_Complete.ipynb">
Build a production-ready Graph Retrieval Augmented Generation system with hybrid retrieval and logical inference.
**Topics:** RAG, LLMs, Vector Search, Graph Traversal · **Difficulty:** Advanced
</Card>
<Card title="RAG vs. GraphRAG Comparison" icon="scale-balanced" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/use_cases/advanced_rag/02_RAG_vs_GraphRAG_Comparison.ipynb">
Side-by-side benchmark of standard RAG vs. GraphRAG on real-world data.
**Topics:** RAG, GraphRAG, Benchmarking · **Difficulty:** Intermediate
</Card>
<Card title="Real-Time Anomaly Detection" icon="shield-halved" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/use_cases/cybersecurity/01_Real_Time_Anomaly_Detection.ipynb">
Detect anomalies in streaming data using dynamic knowledge graphs.
**Topics:** Streaming, Security, Dynamic Graphs · **Difficulty:** Advanced
</Card>
</CardGroup>
---
## Core Tutorials
Essential guides to master the Semantica framework.
<CardGroup cols={2}>
<Card title="Welcome to Semantica" icon="hands" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/introduction/01_Welcome_to_Semantica.ipynb">
An interactive introduction to the framework's core philosophy and all modules.
**Topics:** Framework Overview, Architecture · **Difficulty:** Beginner
</Card>
<Card title="Data Ingestion" icon="database" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/introduction/02_Data_Ingestion.ipynb">
Loading data from files, web, databases, streams, feeds, repositories, email, and MCP.
**Topics:** FileIngestor, WebIngestor, DBIngestor, Streams · **Difficulty:** Beginner
</Card>
<Card title="Document Parsing" icon="file-lines" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/introduction/03_Document_Parsing.ipynb">
Extracting clean text from complex formats like PDF, DOCX, and HTML.
**Topics:** OCR, PDF Parsing, Text Extraction · **Difficulty:** Beginner
</Card>
<Card title="Data Normalization" icon="broom" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/introduction/04_Data_Normalization.ipynb">
Pipelines for cleaning, normalizing, and preparing text.
**Topics:** Text Cleaning, Unicode, Formatting · **Difficulty:** Beginner
</Card>
<Card title="Entity Extraction" icon="magnifying-glass" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/introduction/05_Entity_Extraction.ipynb">
Using NER to identify people, organizations, and custom entities.
**Topics:** NER, spaCy, LLM Extraction · **Difficulty:** Beginner
</Card>
<Card title="Relation Extraction" icon="arrows-split-up-and-left" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/introduction/06_Relation_Extraction.ipynb">
Discovering and classifying relationships between entities.
**Topics:** Relation Classification, Dependency Parsing · **Difficulty:** Beginner
</Card>
<Card title="Embedding Generation" icon="vector-square" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/introduction/12_Embedding_Generation.ipynb">
Creating and managing vector embeddings for semantic search.
**Topics:** Embeddings, OpenAI, HuggingFace · **Difficulty:** Intermediate
</Card>
<Card title="Vector Store" icon="database" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/introduction/13_Vector_Store.ipynb">
Setting up vector stores for similarity search and retrieval.
**Difficulty:** Intermediate
</Card>
<Card title="Graph Store" icon="server" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/introduction/09_Graph_Store.ipynb">
Persisting knowledge graphs in Neo4j or FalkorDB.
**Topics:** Neo4j, Cypher, Persistence · **Difficulty:** Intermediate
</Card>
<Card title="Ontology" icon="sitemap" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/introduction/14_Ontology.ipynb">
Defining domain schemas and ontologies to structure your data.
**Topics:** OWL, RDF, Schema Design · **Difficulty:** Intermediate
</Card>
</CardGroup>
---
## Advanced Concepts
Deep dive into advanced features, customization, and complex workflows.
<CardGroup cols={2}>
<Card title="Advanced Extraction" icon="flask" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/advanced/01_Advanced_Extraction.ipynb">
Custom extractors, LLM-based extraction, and complex pattern matching.
**Topics:** Custom Models, Regex, LLMs · **Difficulty:** Advanced
</Card>
<Card title="Advanced Graph Analytics" icon="chart-network" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/advanced/02_Advanced_Graph_Analytics.ipynb">
Centrality, community detection, and pathfinding algorithms.
**Topics:** PageRank, Louvain, Shortest Path · **Difficulty:** Advanced
</Card>
<Card title="Advanced Context Engineering" icon="brain" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/advanced/11_Advanced_Context_Engineering.ipynb">
Production-grade memory system for AI agents using FAISS and Neo4j.
**Topics:** Agent Memory, GraphRAG, Entity Injection · **Difficulty:** Advanced
</Card>
<Card title="Complete Visualization Suite" icon="chart-bar" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/advanced/03_Complete_Visualization_Suite.ipynb">
Interactive, publication-ready visualizations of your graphs.
**Topics:** PyVis, NetworkX, D3.js · **Difficulty:** Intermediate
</Card>
<Card title="Conflict Resolution" icon="scale-balanced" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/introduction/17_Conflict_Detection_and_Resolution.ipynb">
Strategies for handling contradictory information from multiple sources.
**Topics:** Truth Discovery, Voting, Confidence · **Difficulty:** Advanced
</Card>
<Card title="Multi-Format Export" icon="file-export" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/advanced/05_Multi_Format_Export.ipynb">
Exporting to RDF, OWL, JSON-LD, and NetworkX formats.
**Topics:** Serialization, Interoperability · **Difficulty:** Intermediate
</Card>
<Card title="Multi-Source Integration" icon="code-merge" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/advanced/06_Multi_Source_Data_Integration.ipynb">
Merging data from disparate sources into a unified graph.
**Topics:** Entity Resolution, Merging, Fusion · **Difficulty:** Advanced
</Card>
<Card title="Pipeline Orchestration" icon="gear" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/advanced/07_Pipeline_Orchestration.ipynb">
Building robust, automated data processing pipelines.
**Topics:** Workflows, Automation, Error Handling · **Difficulty:** Advanced
</Card>
<Card title="Reasoning and Inference" icon="brain" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/advanced/08_Reasoning_and_Inference.ipynb">
Using logical reasoning to infer new knowledge from existing facts.
**Topics:** Logic Rules, Inference Engines · **Difficulty:** Advanced
</Card>
<Card title="Temporal Knowledge Graphs" icon="clock" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/advanced/10_Temporal_Knowledge_Graphs.ipynb">
Modeling and querying data that changes over time.
**Topics:** Time Series, Temporal Logic, Allen Algebra · **Difficulty:** Advanced
</Card>
</CardGroup>
---
## Industry Use Cases
### Biomedical
<CardGroup cols={2}>
<Card title="Drug Discovery Pipeline" icon="pills" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/use_cases/biomedical/01_Drug_Discovery_Pipeline.ipynb">
Accelerating drug discovery by connecting genes, proteins, and drugs using PubMed RSS feeds, entity-aware chunking, GraphRAG, and vector similarity search.
**Topics:** Bioinformatics, KG Construction, GraphRAG · **Difficulty:** Advanced
</Card>
<Card title="Genomic Variant Analysis" icon="dna" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/use_cases/biomedical/02_Genomic_Variant_Analysis.ipynb">
Analyzing genomic variants and their implications using bioRxiv RSS feeds, temporal KGs, deduplication, and pathway analysis.
**Topics:** Genomics, Temporal KGs, Graph Analytics · **Difficulty:** Advanced
</Card>
</CardGroup>
### Finance
<CardGroup cols={2}>
<Card title="Financial Data Integration (MCP)" icon="chart-line" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/use_cases/finance/01_Financial_Data_Integration_MCP.ipynb">
Merging financial data from Alpha Vantage API, MCP servers, RSS feeds, and market feeds.
**Topics:** Finance, Data Fusion, MCP Integration · **Difficulty:** Intermediate
</Card>
<Card title="Fraud Detection" icon="user-secret" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/use_cases/finance/02_Fraud_Detection.ipynb">
Identifying fraudulent activities in transaction networks using temporal KGs, conflict detection, and pattern recognition.
**Topics:** Anomaly Detection, Graph Mining, Temporal Analysis · **Difficulty:** Advanced
</Card>
</CardGroup>
### Blockchain
<CardGroup cols={2}>
<Card title="DeFi Protocol Intelligence" icon="bitcoin-sign" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/use_cases/blockchain/01_DeFi_Protocol_Intelligence.ipynb">
Analyzing decentralized finance protocols and transaction flows using CoinDesk RSS feeds, ontology-aware chunking, and conflict detection.
**Topics:** Blockchain, DeFi, Smart Contracts, Ontology · **Difficulty:** Advanced
</Card>
<Card title="Transaction Network Analysis" icon="network-wired" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/use_cases/blockchain/02_Transaction_Network_Analysis.ipynb">
Mapping and analyzing blockchain transaction networks using deduplication and network pattern detection.
**Topics:** Blockchain Analytics, Network Analysis · **Difficulty:** Advanced
</Card>
</CardGroup>
### Cybersecurity
<CardGroup cols={2}>
<Card title="Real-Time Anomaly Detection" icon="shield-halved" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/use_cases/cybersecurity/01_Real_Time_Anomaly_Detection.ipynb">
Detecting anomalies in real-time network traffic streams using CVE RSS feeds, Kafka streams, and temporal KGs.
**Topics:** Network Security, Streaming, Temporal KGs · **Difficulty:** Advanced
</Card>
<Card title="Threat Intelligence Hybrid RAG" icon="robot" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/use_cases/cybersecurity/02_Threat_Intelligence_Hybrid_RAG.ipynb">
Combining enhanced GraphRAG with threat intelligence for security insights.
**Topics:** Threat Intelligence, GraphRAG, Hybrid Retrieval · **Difficulty:** Advanced
</Card>
</CardGroup>
### Intelligence
<CardGroup cols={2}>
<Card title="Criminal Network Analysis" icon="users" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/use_cases/intelligence/01_Criminal_Network_Analysis.ipynb">
Analyze criminal networks with graph analytics and key player detection using OSINT RSS feeds and network centrality analysis.
**Topics:** Forensics, Social Network Analysis · **Difficulty:** Advanced
</Card>
<Card title="Intelligence Analysis Orchestrator" icon="file-magnifying-glass" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/use_cases/intelligence/02_Intelligence_Analysis_Orchestrator_Worker.ipynb">
Comprehensive intelligence analysis using pipeline orchestrator with multiple RSS feeds and multi-source integration.
**Topics:** Intelligence Analysis, Pipeline Orchestration · **Difficulty:** Advanced
</Card>
</CardGroup>
### Renewable Energy & Supply Chain
<CardGroup cols={2}>
<Card title="Energy Market Analysis" icon="wind" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/use_cases/renewable_energy/01_Energy_Market_Analysis.ipynb">
Analyzing trends and pricing in the renewable energy market using EIA API, temporal KGs, and TemporalPatternDetector.
**Topics:** Energy, Time Series, Temporal Analysis · **Difficulty:** Intermediate
</Card>
<Card title="Supply Chain Data Integration" icon="truck" href="https://github.com/semantica-agi/semantica/blob/main/cookbook/use_cases/supply_chain/01_Supply_Chain_Data_Integration.ipynb">
Integrating supply chain data to optimize logistics and reduce risk.
**Topics:** Logistics, Risk Management, Deduplication · **Difficulty:** Advanced
</Card>
</CardGroup>
---
## How to Run
<Steps>
<Step title="Install Semantica">
```bash
pip install semantica[all]
pip install jupyter
```
</Step>
<Step title="Clone the repository (optional, for source install)">
```bash
git clone https://github.com/semantica-agi/semantica.git
cd semantica
pip install -e ".[all]"
pip install jupyter
```
</Step>
<Step title="Launch Jupyter">
```bash
jupyter notebook
```
</Step>
</Steps>
<Tip>
You can also run the cookbook using Docker:
```bash
docker run -p 8888:8888 hawksight/semantica-cookbook
```
</Tip>